Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC18.37■□□□□ 0.53
Slx4Q6P1D7 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC18.37■□□□□ 0.53
Slx4Q6P1D7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Gm44292-201ENSMUST00000205194 2364 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Gm15374-201ENSMUST00000119313 844 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Gm25998-201ENSMUST00000175397 53 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Gm9081-201ENSMUST00000182346 991 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 AC164437.3-201ENSMUST00000228323 347 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Gm37391-201ENSMUST00000194891 2318 ntBASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slx4Q6P1D7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm18642-201ENSMUST00000206642 1400 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm22379-201ENSMUST00000157480 131 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm17709-201ENSMUST00000174536 1096 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm9916-201ENSMUST00000192943 1228 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm42430-201ENSMUST00000197209 616 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm45085-201ENSMUST00000209100 441 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Gm42928-201ENSMUST00000197338 3339 ntBASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Slx4Q6P1D7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm43752-201ENSMUST00000198475 697 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm44953-201ENSMUST00000208745 1286 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm45199-201ENSMUST00000207640 1507 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm18983-201ENSMUST00000222884 2729 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms