Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Krt39Q6IFX4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gm5781-201ENSMUST00000219792 443 ntBASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt39Q6IFX4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm37424-201ENSMUST00000191727 561 ntBASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm9136-201ENSMUST00000193368 454 ntBASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Krt39Q6IFX4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.4□□□□□ -0.27
Krt39Q6IFX4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms