Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm17837-201ENSMUST00000186435 985 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm27618-201ENSMUST00000183671 60 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav3-3Q5R1C3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav3-3Q5R1C3 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms