Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx3-2P97503 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm23119-201ENSMUST00000158610 140 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm25700-201ENSMUST00000177693 110 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm9230-201ENSMUST00000188228 532 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm45598-202ENSMUST00000210719 986 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.53□□□□□ -0.56
Nkx3-2P97503 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.53□□□□□ -0.56
Nkx3-2P97503 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx3-2P97503 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx3-2P97503 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.52□□□□□ -0.56
Nkx3-2P97503 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx3-2P97503 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx3-2P97503 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nkx3-2P97503 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.52□□□□□ -0.57
Nkx3-2P97503 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Rps4l-202ENSMUST00000204242 789 ntBASIC11.52□□□□□ -0.57
Nkx3-2P97503 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.52□□□□□ -0.57
Nkx3-2P97503 Gm8913-201ENSMUST00000209491 641 ntBASIC11.52□□□□□ -0.57
Nkx3-2P97503 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.52□□□□□ -0.57
Nkx3-2P97503 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nkx3-2P97503 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms