Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm44882-201ENSMUST00000205702 802 ntBASIC11.02□□□□□ -0.65
Lsm3P62311 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.02□□□□□ -0.65
Lsm3P62311 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Lsm3P62311 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.02□□□□□ -0.65
Lsm3P62311 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.02□□□□□ -0.65
Lsm3P62311 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Lsm3P62311 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lsm3P62311 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Lsm3P62311 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Lsm3P62311 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm3P62311 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Lsm3P62311 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lsm3P62311 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm3P62311 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.01□□□□□ -0.65
Lsm3P62311 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.01□□□□□ -0.65
Lsm3P62311 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Gm17837-201ENSMUST00000186435 985 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Lsm3P62311 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.01□□□□□ -0.65
Lsm3P62311 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lsm3P62311 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
Lsm3P62311 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Lsm3P62311 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Gm43522-201ENSMUST00000196697 1922 ntBASIC11□□□□□ -0.65
Lsm3P62311 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11□□□□□ -0.65
Lsm3P62311 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Lsm3P62311 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11□□□□□ -0.65
Lsm3P62311 Gm15703-201ENSMUST00000120250 880 ntBASIC11□□□□□ -0.65
Lsm3P62311 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11□□□□□ -0.65
Lsm3P62311 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms