Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.14□□□□□ -0.47
Gja4P28235 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.14□□□□□ -0.47
Gja4P28235 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gja4P28235 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.14□□□□□ -0.47
Gja4P28235 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gja4P28235 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Gja4P28235 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.14□□□□□ -0.47
Gja4P28235 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.14□□□□□ -0.47
Gja4P28235 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gja4P28235 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.13□□□□□ -0.47
Gja4P28235 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.13□□□□□ -0.47
Gja4P28235 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.13□□□□□ -0.47
Gja4P28235 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gja4P28235 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.13□□□□□ -0.47
Gja4P28235 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.13□□□□□ -0.47
Gja4P28235 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Gm8194-201ENSMUST00000159783 859 ntBASIC12.13□□□□□ -0.47
Gja4P28235 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.13□□□□□ -0.47
Gja4P28235 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Gm7600-201ENSMUST00000209657 785 ntBASIC12.13□□□□□ -0.47
Gja4P28235 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.13□□□□□ -0.47
Gja4P28235 Snora73b-201ENSMUST00000083419 205 ntBASIC12.13□□□□□ -0.47
Gja4P28235 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.13□□□□□ -0.47
Gja4P28235 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Gja4P28235 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gja4P28235 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.13□□□□□ -0.47
Gja4P28235 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gja4P28235 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gja4P28235 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Gja4P28235 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gja4P28235 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Gja4P28235 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.12□□□□□ -0.47
Gja4P28235 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Gja4P28235 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.12□□□□□ -0.47
Gja4P28235 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Gja4P28235 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Gm12579-201ENSMUST00000118040 783 ntBASIC12.12□□□□□ -0.47
Gja4P28235 Gm11246-201ENSMUST00000120880 345 ntBASIC12.12□□□□□ -0.47
Gja4P28235 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gja4P28235 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.12□□□□□ -0.47
Gja4P28235 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.12□□□□□ -0.47
Gja4P28235 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gja4P28235 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms