Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rnf13O54965 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rnf13O54965 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11□□□□□ -0.65
Rnf13O54965 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rnf13O54965 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11□□□□□ -0.65
Rnf13O54965 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Rnf13O54965 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11□□□□□ -0.65
Rnf13O54965 Gm3287-205ENSMUST00000228893 1332 ntBASIC11□□□□□ -0.65
Rnf13O54965 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Rnf13O54965 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11□□□□□ -0.65
Rnf13O54965 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf13O54965 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.99□□□□□ -0.65
Rnf13O54965 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.99□□□□□ -0.65
Rnf13O54965 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.99□□□□□ -0.65
Rnf13O54965 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.99□□□□□ -0.65
Rnf13O54965 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.99□□□□□ -0.65
Rnf13O54965 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.99□□□□□ -0.65
Rnf13O54965 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rnf13O54965 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rnf13O54965 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Rnf13O54965 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf13O54965 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf13O54965 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf13O54965 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms