Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Atn1O35126 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.84□□□□□ -0.51
Atn1O35126 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.84□□□□□ -0.51
Atn1O35126 Gm24830-201ENSMUST00000102024 166 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.84□□□□□ -0.51
Atn1O35126 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atn1O35126 Gm27731-201ENSMUST00000185192 107 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.84□□□□□ -0.51
Atn1O35126 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.84□□□□□ -0.51
Atn1O35126 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.84□□□□□ -0.51
Atn1O35126 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atn1O35126 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Atn1O35126 Gm26232-201ENSMUST00000083360 166 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atn1O35126 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Atn1O35126 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.84□□□□□ -0.51
Atn1O35126 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.84□□□□□ -0.51
Atn1O35126 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atn1O35126 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Atn1O35126 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Atn1O35126 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atn1O35126 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.83□□□□□ -0.51
Atn1O35126 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Atn1O35126 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.83□□□□□ -0.51
Atn1O35126 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atn1O35126 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atn1O35126 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Atn1O35126 Gm22018-201ENSMUST00000104357 131 ntBASIC11.83□□□□□ -0.52
Atn1O35126 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Atn1O35126 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Gm14660-201ENSMUST00000119809 575 ntBASIC11.83□□□□□ -0.52
Atn1O35126 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.83□□□□□ -0.52
Atn1O35126 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Gm5781-201ENSMUST00000219792 443 ntBASIC11.83□□□□□ -0.52
Atn1O35126 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.83□□□□□ -0.52
Atn1O35126 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atn1O35126 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atn1O35126 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.82□□□□□ -0.52
Atn1O35126 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.82□□□□□ -0.52
Atn1O35126 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.82□□□□□ -0.52
Atn1O35126 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atn1O35126 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atn1O35126 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Atn1O35126 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.82□□□□□ -0.52
Atn1O35126 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.82□□□□□ -0.52
Atn1O35126 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.82□□□□□ -0.52
Atn1O35126 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atn1O35126 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms