Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm23596-201ENSMUST00000104304 132 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm23912-201ENSMUST00000104687 87 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12616-201ENSMUST00000118594 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12501-201ENSMUST00000119163 529 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Mir1943-201ENSMUST00000158276 73 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12624-201ENSMUST00000177615 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12621-201ENSMUST00000177760 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12615-201ENSMUST00000177970 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12622-201ENSMUST00000177975 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12627-201ENSMUST00000178412 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12625-201ENSMUST00000179122 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12614-201ENSMUST00000179586 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm12613-201ENSMUST00000180323 382 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm9211-201ENSMUST00000182882 975 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Srp54bE9PXC0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm28719-201ENSMUST00000187779 1757 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm12196-201ENSMUST00000120954 262 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm24514-201ENSMUST00000174961 285 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm9555-201ENSMUST00000200908 583 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm807-202ENSMUST00000224929 408 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm13812-201ENSMUST00000118061 1347 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm13810-201ENSMUST00000118584 1347 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12□□□□□ -0.49
Srp54bE9PXC0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm6580-201ENSMUST00000117504 1357 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm18782-201ENSMUST00000209023 1399 ntBASIC12□□□□□ -0.49
Srp54bE9PXC0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms