Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.98□□□□□ -0.65
Smim17A0A504 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smim17A0A504 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smim17A0A504 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smim17A0A504 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smim17A0A504 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smim17A0A504 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smim17A0A504 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.98□□□□□ -0.65
Smim17A0A504 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smim17A0A504 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.98□□□□□ -0.65
Smim17A0A504 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.97□□□□□ -0.65
Smim17A0A504 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Smim17A0A504 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Smim17A0A504 Gm24231-201ENSMUST00000104315 133 ntBASIC10.97□□□□□ -0.65
Smim17A0A504 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.97□□□□□ -0.65
Smim17A0A504 Gm15376-201ENSMUST00000122258 783 ntBASIC10.97□□□□□ -0.65
Smim17A0A504 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Smim17A0A504 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.97□□□□□ -0.65
Smim17A0A504 Gm17837-201ENSMUST00000186435 985 ntBASIC10.97□□□□□ -0.65
Smim17A0A504 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.97□□□□□ -0.65
Smim17A0A504 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Smim17A0A504 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Smim17A0A504 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.97□□□□□ -0.65
Smim17A0A504 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Smim17A0A504 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Smim17A0A504 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Smim17A0A504 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Smim17A0A504 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Smim17A0A504 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Smim17A0A504 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 Gm11439-201ENSMUST00000118598 409 ntBASIC10.96□□□□□ -0.65
Smim17A0A504 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.96□□□□□ -0.65
Smim17A0A504 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smim17A0A504 Gm22175-201ENSMUST00000175007 78 ntBASIC10.96□□□□□ -0.65
Smim17A0A504 Gm4034-201ENSMUST00000187674 480 ntBASIC10.96□□□□□ -0.65
Smim17A0A504 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms