Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm26286-201ENSMUST00000104166 134 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm5616-201ENSMUST00000165252 384 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm8741-201ENSMUST00000174736 384 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm38241-201ENSMUST00000192641 898 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm37666-201ENSMUST00000194110 866 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm17812-201ENSMUST00000204935 318 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm44262-201ENSMUST00000204969 372 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm9257-201ENSMUST00000221254 232 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Upk3aQ9JKX8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3aQ9JKX8 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm22133-201ENSMUST00000102082 109 ntBASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 AY036118-201ENSMUST00000200021 923 ntBASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm8956-201ENSMUST00000203939 825 ntBASIC11.66□□□□□ -0.54
Upk3aQ9JKX8 Gm45186-201ENSMUST00000206874 478 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms