Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Chchd1Q9CQA6 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Chchd1Q9CQA6 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Gm12585-201ENSMUST00000117307 290 ntBASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.09□□□□□ -0.95
Chchd1Q9CQA6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms