Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usp11Q99K46 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usp11Q99K46 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.85□□□□□ -0.35
Usp11Q99K46 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Usp11Q99K46 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Gm22058-201ENSMUST00000083393 310 ntBASIC12.84□□□□□ -0.35
Usp11Q99K46 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Usp11Q99K46 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Usp11Q99K46 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.83□□□□□ -0.36
Usp11Q99K46 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp11Q99K46 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gm10434-201ENSMUST00000101158 471 ntBASIC12.83□□□□□ -0.36
Usp11Q99K46 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gm18935-201ENSMUST00000212692 664 ntBASIC12.83□□□□□ -0.36
Usp11Q99K46 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gm7046-201ENSMUST00000221351 977 ntBASIC12.83□□□□□ -0.36
Usp11Q99K46 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Usp11Q99K46 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Usp11Q99K46 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usp11Q99K46 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
Usp11Q99K46 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Usp11Q99K46 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp11Q99K46 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usp11Q99K46 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usp11Q99K46 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.82□□□□□ -0.36
Usp11Q99K46 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms