Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SfpqQ8VIJ6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm15806-201ENSMUST00000120696 955 ntBASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Auts2-212ENSMUST00000178555 309 ntBASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SfpqQ8VIJ6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm24830-201ENSMUST00000102024 166 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm29649-201ENSMUST00000185649 419 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm26232-201ENSMUST00000083360 166 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SfpqQ8VIJ6 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms