Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkd2Q8VE28 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm23270-201ENSMUST00000104055 131 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm11439-201ENSMUST00000118598 409 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm13813-201ENSMUST00000120998 787 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm5950-201ENSMUST00000213337 772 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm26035-201ENSMUST00000083065 308 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkd2Q8VE28 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkd2Q8VE28 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms