Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.39□□□□□ -0.11
Cchcr1Q8K2I2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm22018-201ENSMUST00000104357 131 ntBASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm18187-201ENSMUST00000196476 984 ntBASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.38□□□□□ -0.11
Cchcr1Q8K2I2 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gm11425-201ENSMUST00000119608 498 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gm25043-201ENSMUST00000158604 212 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Mospd4-201ENSMUST00000180618 576 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gm43133-201ENSMUST00000197472 463 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gm9396-201ENSMUST00000076703 567 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cchcr1Q8K2I2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cchcr1Q8K2I2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms