Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm14724-201ENSMUST00000118400 537 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm14665-201ENSMUST00000122294 557 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm5733-201ENSMUST00000190232 939 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm2965-201ENSMUST00000198365 343 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm10288-201ENSMUST00000084614 537 ntBASIC11.9□□□□□ -0.5
Rab43Q8CG50 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab43Q8CG50 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Rab43Q8CG50 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rab43Q8CG50 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rab43Q8CG50 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rab43Q8CG50 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm12857-201ENSMUST00000117678 592 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm43916-201ENSMUST00000205062 967 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm4607-201ENSMUST00000206649 577 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm44545-201ENSMUST00000208262 746 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Ginm1-202ENSMUST00000065124 300 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.89□□□□□ -0.51
Rab43Q8CG50 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Rab43Q8CG50 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab43Q8CG50 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms