Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpn1Q8CCS6 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpn1Q8CCS6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pabpn1Q8CCS6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Mir6387-201ENSMUST00000184042 108 ntBASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gm43966-201ENSMUST00000203301 612 ntBASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Gm44106-201ENSMUST00000203153 1599 ntBASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pabpn1Q8CCS6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pabpn1Q8CCS6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Mir598-201ENSMUST00000102094 79 ntBASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Gm8464-202ENSMUST00000146697 1142 ntBASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Gm4750-201ENSMUST00000151942 1142 ntBASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Gm43117-201ENSMUST00000198531 379 ntBASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 AC118639.1-202ENSMUST00000226957 653 ntBASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pabpn1Q8CCS6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 AC158777.1-201ENSMUST00000226216 1724 ntBASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Gm4705-201ENSMUST00000177415 354 ntBASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Gm27444-201ENSMUST00000184157 137 ntBASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Gm42687-201ENSMUST00000199075 164 ntBASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Rab3c-202ENSMUST00000223922 2398 ntBASIC18.44■□□□□ 0.54
Pabpn1Q8CCS6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC18.43■□□□□ 0.54
Pabpn1Q8CCS6 Gm8268-201ENSMUST00000209683 458 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms