Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm7541-201ENSMUST00000118361 535 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a6Q8C6K9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Rprl1-201ENSMUST00000158050 327 ntBASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Gm18059-201ENSMUST00000208073 580 ntBASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a6Q8C6K9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Gm24844-201ENSMUST00000158679 127 ntBASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Gm44158-201ENSMUST00000203881 505 ntBASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a6Q8C6K9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms