Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm45865-201ENSMUST00000211815 945 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm8712-201ENSMUST00000221090 701 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm26232-201ENSMUST00000083360 166 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sh3rf3Q8C120 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Gm23270-201ENSMUST00000104055 131 ntBASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Sh3rf3Q8C120 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sh3rf3Q8C120 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms