Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf38Q8BI21 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.77□□□□□ -0.52
Rnf38Q8BI21 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm13736-201ENSMUST00000119272 253 ntBASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Mir1982-201ENSMUST00000157368 74 ntBASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm25261-201ENSMUST00000157416 134 ntBASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm25857-201ENSMUST00000082788 129 ntBASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rnf38Q8BI21 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Gm12314-201ENSMUST00000118104 538 ntBASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Gm7809-201ENSMUST00000153199 742 ntBASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Gm42937-201ENSMUST00000197360 752 ntBASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rnf38Q8BI21 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf38Q8BI21 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms