Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RIF1Q5UIP0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 CFL1P6-201ENST00000400899 494 ntBASIC14.54□□□□□ -0.08
RIF1Q5UIP0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 RN7SL494P-201ENST00000461517 304 ntBASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AC068867.1-201ENST00000559855 150 ntBASIC14.54□□□□□ -0.08
RIF1Q5UIP0 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 HLA-K-203ENST00000430151 1046 ntBASIC14.54□□□□□ -0.08
RIF1Q5UIP0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.54□□□□□ -0.08
RIF1Q5UIP0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 BPIFB5P-201ENST00000457066 1099 ntBASIC14.53□□□□□ -0.08
RIF1Q5UIP0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC092862.1-201ENST00000541534 533 ntBASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 KRT8P30-201ENST00000432100 650 ntBASIC14.53□□□□□ -0.08
RIF1Q5UIP0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC008972.2-201ENST00000606587 494 ntBASIC14.53□□□□□ -0.08
RIF1Q5UIP0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RIF1Q5UIP0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AC141586.5-201ENST00000624546 2050 ntBASIC14.52□□□□□ -0.08
RIF1Q5UIP0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 ACTG1P19-201ENST00000418987 1116 ntBASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 ORAOV1P1-201ENST00000503108 395 ntBASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AC068831.5-201ENST00000557387 328 ntBASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AL590235.1-201ENST00000564650 861 ntBASIC14.52□□□□□ -0.08
RIF1Q5UIP0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RIF1Q5UIP0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms