Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pkd1l3Q2EG98 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pkd1l3Q2EG98 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pkd1l3Q2EG98 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12616-201ENSMUST00000118594 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm7722-201ENSMUST00000120646 741 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Rprl1-201ENSMUST00000158050 327 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12624-201ENSMUST00000177615 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12621-201ENSMUST00000177760 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12615-201ENSMUST00000177970 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12622-201ENSMUST00000177975 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12627-201ENSMUST00000178412 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12625-201ENSMUST00000179122 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12614-201ENSMUST00000179586 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm12613-201ENSMUST00000180323 382 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm28071-201ENSMUST00000190355 478 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pkd1l3Q2EG98 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pkd1l3Q2EG98 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pkd1l3Q2EG98 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Pkd1l3Q2EG98 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pkd1l3Q2EG98 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Pkd1l3Q2EG98 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 117.9 ms