Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox4Q06831 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox4Q06831 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sox4Q06831 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox4Q06831 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Gm15236-201ENSMUST00000117309 379 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Gm13996-201ENSMUST00000118456 430 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox4Q06831 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox4Q06831 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox4Q06831 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox4Q06831 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox4Q06831 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox4Q06831 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox4Q06831 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.98□□□□□ -0.49
Sox4Q06831 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox4Q06831 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox4Q06831 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox4Q06831 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox4Q06831 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
Sox4Q06831 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.97□□□□□ -0.49
Sox4Q06831 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Sox4Q06831 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm17812-201ENSMUST00000204935 318 ntBASIC11.97□□□□□ -0.49
Sox4Q06831 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox4Q06831 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.97□□□□□ -0.49
Sox4Q06831 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox4Q06831 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.97□□□□□ -0.49
Sox4Q06831 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox4Q06831 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox4Q06831 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sox4Q06831 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox4Q06831 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Sox4Q06831 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox4Q06831 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms