Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.68□□□□□ -0.54
Slc9a3r1P70441 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc9a3r1P70441 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm15711-201ENSMUST00000118889 535 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm12380-201ENSMUST00000119012 544 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 AY036118-201ENSMUST00000200021 923 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Matn2-203ENSMUST00000226766 3252 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.67□□□□□ -0.54
Slc9a3r1P70441 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Slc9a3r1P70441 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms