Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir7221-201ENSMUST00000184009 72 ntBASIC12.43□□□□□ -0.42
Sox1P53783 Gm18776-201ENSMUST00000188833 654 ntBASIC12.43□□□□□ -0.42
Sox1P53783 Gm19931-201ENSMUST00000198920 368 ntBASIC12.43□□□□□ -0.42
Sox1P53783 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox1P53783 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sox1P53783 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox1P53783 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Sox1P53783 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox1P53783 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox1P53783 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox1P53783 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Gm24279-201ENSMUST00000104236 131 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox1P53783 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox1P53783 Gm11511-201ENSMUST00000118146 540 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox1P53783 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox1P53783 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox1P53783 Gm24943-201ENSMUST00000158329 433 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Gm29808-201ENSMUST00000194419 468 ntBASIC12.42□□□□□ -0.42
Sox1P53783 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Gm8342-201ENSMUST00000209839 757 ntBASIC12.42□□□□□ -0.42
Sox1P53783 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Sox1P53783 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox1P53783 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox1P53783 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.42□□□□□ -0.42
Sox1P53783 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox1P53783 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sox1P53783 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox1P53783 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Sox1P53783 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sox1P53783 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox1P53783 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Gm11996-201ENSMUST00000117538 915 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Gm14270-201ENSMUST00000118388 846 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox1P53783 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.41□□□□□ -0.42
Sox1P53783 Gm17192-201ENSMUST00000169031 511 ntBASIC12.41□□□□□ -0.42
Sox1P53783 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Gm9204-201ENSMUST00000212641 947 ntBASIC12.41□□□□□ -0.42
Sox1P53783 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox1P53783 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.41□□□□□ -0.42
Sox1P53783 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.41□□□□□ -0.42
Sox1P53783 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox1P53783 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms