Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.87□□□□□ -0.35
Shmt1P50431 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shmt1P50431 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Shmt1P50431 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Gm23200-201ENSMUST00000104379 132 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.86□□□□□ -0.35
Shmt1P50431 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.86□□□□□ -0.35
Shmt1P50431 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 Gm28450-201ENSMUST00000187349 638 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 AY036118-201ENSMUST00000200021 923 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.86□□□□□ -0.35
Shmt1P50431 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.86□□□□□ -0.35
Shmt1P50431 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Shmt1P50431 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.86□□□□□ -0.35
Shmt1P50431 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shmt1P50431 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Shmt1P50431 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Shmt1P50431 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.85□□□□□ -0.35
Shmt1P50431 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.85□□□□□ -0.35
Shmt1P50431 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Shmt1P50431 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Gm15711-201ENSMUST00000118889 535 ntBASIC12.85□□□□□ -0.35
Shmt1P50431 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.85□□□□□ -0.35
Shmt1P50431 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Shmt1P50431 Gm27627-201ENSMUST00000183644 150 ntBASIC12.85□□□□□ -0.35
Shmt1P50431 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.85□□□□□ -0.35
Shmt1P50431 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.85□□□□□ -0.35
Shmt1P50431 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.85□□□□□ -0.35
Shmt1P50431 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shmt1P50431 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.84□□□□□ -0.35
Shmt1P50431 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Shmt1P50431 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shmt1P50431 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Shmt1P50431 Map1b-203ENSMUST00000223725 2669 ntBASIC12.84□□□□□ -0.35
Shmt1P50431 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Shmt1P50431 Gm23949-201ENSMUST00000104027 127 ntBASIC12.84□□□□□ -0.35
Shmt1P50431 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shmt1P50431 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.84□□□□□ -0.35
Shmt1P50431 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shmt1P50431 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.84□□□□□ -0.35
Shmt1P50431 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms