Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Gm4607-201ENSMUST00000206649 577 ntBASIC12.43□□□□□ -0.42
Rc3h2P0C090 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.43□□□□□ -0.42
Rc3h2P0C090 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Rc3h2P0C090 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rc3h2P0C090 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm11511-201ENSMUST00000118146 540 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm25881-201ENSMUST00000157783 103 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm22334-201ENSMUST00000158070 133 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm5369-201ENSMUST00000217499 588 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm21811-201ENSMUST00000096485 930 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.42□□□□□ -0.42
Rc3h2P0C090 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rc3h2P0C090 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm23596-201ENSMUST00000104304 132 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm5523-201ENSMUST00000180415 997 ntBASIC12.41□□□□□ -0.42
Rc3h2P0C090 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms