Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
TCRAP04437 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 MRPL3P1-201ENST00000400109 1033 ntBASIC11.67□□□□□ -0.54
TCRAP04437 MIR1224-201ENST00000408193 85 ntBASIC11.67□□□□□ -0.54
TCRAP04437 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.67□□□□□ -0.54
TCRAP04437 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 SPDYE11-202ENST00000450699 704 ntBASIC11.67□□□□□ -0.54
TCRAP04437 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.67□□□□□ -0.54
TCRAP04437 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
TCRAP04437 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.67□□□□□ -0.54
TCRAP04437 AC106730.1-201ENST00000566722 1090 ntBASIC11.67□□□□□ -0.54
TCRAP04437 SPDYE9P-201ENST00000570642 692 ntBASIC11.67□□□□□ -0.54
TCRAP04437 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.67□□□□□ -0.54
TCRAP04437 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
TCRAP04437 SPDYE10P-202ENST00000612005 668 ntBASIC11.67□□□□□ -0.54
TCRAP04437 SPDYE8P-202ENST00000612377 668 ntBASIC11.67□□□□□ -0.54
TCRAP04437 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.67□□□□□ -0.54
TCRAP04437 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TCRAP04437 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.67□□□□□ -0.54
TCRAP04437 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.67□□□□□ -0.54
TCRAP04437 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.66□□□□□ -0.54
TCRAP04437 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 MBLAC2-202ENST00000514906 1936 ntBASIC11.66□□□□□ -0.54
TCRAP04437 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TCRAP04437 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 AC104457.1-201ENST00000401024 814 ntBASIC11.66□□□□□ -0.54
TCRAP04437 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
TCRAP04437 AL353705.2-201ENST00000428243 662 ntBASIC11.66□□□□□ -0.54
TCRAP04437 TARDBPP1-201ENST00000442013 1203 ntBASIC11.66□□□□□ -0.54
TCRAP04437 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.66□□□□□ -0.54
TCRAP04437 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 AL662844.1-201ENST00000546340 181 ntBASIC11.66□□□□□ -0.54
TCRAP04437 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.66□□□□□ -0.54
TCRAP04437 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
TCRAP04437 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 LINC01225-203ENST00000563550 1244 ntBASIC11.66□□□□□ -0.54
TCRAP04437 RARRES2P9-201ENST00000565168 469 ntBASIC11.66□□□□□ -0.54
TCRAP04437 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms