Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm9192-201ENSMUST00000183221 985 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Gm4654-201ENSMUST00000183305 982 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Gm5870-201ENSMUST00000196461 282 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Ighv1-86-201ENSMUST00000200562 353 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.84□□□□□ -0.67
Col5a1O88207 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Col5a1O88207 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Col5a1O88207 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col5a1O88207 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.83□□□□□ -0.67
Col5a1O88207 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Col5a1O88207 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col5a1O88207 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col5a1O88207 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Col5a1O88207 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.83□□□□□ -0.68
Col5a1O88207 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.83□□□□□ -0.68
Col5a1O88207 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.83□□□□□ -0.68
Col5a1O88207 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.83□□□□□ -0.68
Col5a1O88207 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.83□□□□□ -0.68
Col5a1O88207 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.83□□□□□ -0.68
Col5a1O88207 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col5a1O88207 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.83□□□□□ -0.68
Col5a1O88207 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col5a1O88207 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col5a1O88207 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.83□□□□□ -0.68
Col5a1O88207 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col5a1O88207 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.82□□□□□ -0.68
Col5a1O88207 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm44647-201ENSMUST00000207402 428 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.82□□□□□ -0.68
Col5a1O88207 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col5a1O88207 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.82□□□□□ -0.68
Col5a1O88207 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Col5a1O88207 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Map1b-203ENSMUST00000223725 2669 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.82□□□□□ -0.68
Col5a1O88207 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col5a1O88207 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col5a1O88207 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Col5a1O88207 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Col5a1O88207 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms