Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm12579-201ENSMUST00000118040 783 ntBASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm4310-201ENSMUST00000177847 889 ntBASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm9630-201ENSMUST00000178304 885 ntBASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm19287-201ENSMUST00000203190 358 ntBASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28729A0A1B0GSW2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm5706-201ENSMUST00000181525 993 ntBASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm45398-201ENSMUST00000210561 165 ntBASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28729A0A1B0GSW2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm28729A0A1B0GSW2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm15782-201ENSMUST00000121073 445 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm15566-201ENSMUST00000121130 590 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Mir8115-201ENSMUST00000184992 119 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm9540-201ENSMUST00000188230 478 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Gm17831-201ENSMUST00000205579 900 ntBASIC11.83□□□□□ -0.52
Gm28729A0A1B0GSW2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms