Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Olfr284-202ENSMUST00000206647 966 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm18935-201ENSMUST00000212692 664 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm24526-201ENSMUST00000082921 158 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vmp1Q99KU0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm10434-201ENSMUST00000101158 471 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm15198-201ENSMUST00000117283 177 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm13813-201ENSMUST00000120998 787 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Mospd4-201ENSMUST00000180618 576 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm27501-201ENSMUST00000183599 107 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.8□□□□□ -0.52
Vmp1Q99KU0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms