Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm9083-201ENSMUST00000120423 819 ntBASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm44958-201ENSMUST00000203734 736 ntBASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm13097-201ENSMUST00000210722 397 ntBASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm10312-201ENSMUST00000078515 489 ntBASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdha3Q91Y16 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm14109-201ENSMUST00000118814 309 ntBASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm15276-201ENSMUST00000145953 498 ntBASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm35960-201ENSMUST00000202712 767 ntBASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdha3Q91Y16 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm14832-201ENSMUST00000121289 322 ntBASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdha3Q91Y16 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms