Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx39aQ8VDW0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx39aQ8VDW0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx39aQ8VDW0 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.53□□□□□ -0.24
Ddx39aQ8VDW0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ddx39aQ8VDW0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx39aQ8VDW0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ddx39aQ8VDW0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm13035-201ENSMUST00000117496 342 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm12196-201ENSMUST00000120954 262 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm27530-201ENSMUST00000184096 98 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm43184-201ENSMUST00000197247 542 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm44882-201ENSMUST00000205702 802 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Ddx39aQ8VDW0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx39aQ8VDW0 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms