Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm27627-201ENSMUST00000183644 150 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm29615-201ENSMUST00000185371 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28224-201ENSMUST00000186078 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm29001-201ENSMUST00000186177 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28292-201ENSMUST00000186593 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28101-201ENSMUST00000187608 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm29076-201ENSMUST00000187689 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28302-201ENSMUST00000187931 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28646-201ENSMUST00000188220 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28205-201ENSMUST00000189177 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm29032-201ENSMUST00000189797 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm28695-201ENSMUST00000190300 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm37448-201ENSMUST00000192795 697 ntBASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nphp3Q7TNH6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Gm23912-201ENSMUST00000104687 87 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Mir6927-201ENSMUST00000184494 71 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Matn2-203ENSMUST00000226766 3252 ntBASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nphp3Q7TNH6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms