Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tnfaip3Q60769 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tnfaip3Q60769 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfaip3Q60769 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfaip3Q60769 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.52□□□□□ -0.56
Tnfaip3Q60769 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm19994-201ENSMUST00000217086 586 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfaip3Q60769 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Gm45186-201ENSMUST00000206874 478 ntBASIC11.51□□□□□ -0.57
Tnfaip3Q60769 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfaip3Q60769 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms