Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.64□□□□□ -0.55
Nr1h4Q60641 Gm5356-201ENSMUST00000093326 615 ntBASIC11.64□□□□□ -0.55
Nr1h4Q60641 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.64□□□□□ -0.55
Nr1h4Q60641 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nr1h4Q60641 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.63□□□□□ -0.55
Nr1h4Q60641 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.63□□□□□ -0.55
Nr1h4Q60641 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm22331-201ENSMUST00000158066 136 ntBASIC11.63□□□□□ -0.55
Nr1h4Q60641 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm45384-201ENSMUST00000210451 277 ntBASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm29705-201ENSMUST00000212598 474 ntBASIC11.63□□□□□ -0.55
Nr1h4Q60641 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.63□□□□□ -0.55
Nr1h4Q60641 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nr1h4Q60641 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.62□□□□□ -0.55
Nr1h4Q60641 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm8018-201ENSMUST00000173536 789 ntBASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm6180-201ENSMUST00000065243 498 ntBASIC11.62□□□□□ -0.55
Nr1h4Q60641 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.62□□□□□ -0.55
Nr1h4Q60641 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.62□□□□□ -0.55
Nr1h4Q60641 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.62□□□□□ -0.55
Nr1h4Q60641 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms