Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
R3hdm4Q4VBF2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm14208-201ENSMUST00000119645 678 ntBASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm5706-201ENSMUST00000181525 993 ntBASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm37666-201ENSMUST00000194110 866 ntBASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm42599-201ENSMUST00000201308 469 ntBASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
R3hdm4Q4VBF2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm5419-201ENSMUST00000119301 527 ntBASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm24749-201ENSMUST00000157838 343 ntBASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm2383-201ENSMUST00000181461 807 ntBASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm4607-201ENSMUST00000206649 577 ntBASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm17931-201ENSMUST00000208132 634 ntBASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
R3hdm4Q4VBF2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
R3hdm4Q4VBF2 Cog3-203ENSMUST00000227473 4197 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms