Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ebf1Q07802 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ebf1Q07802 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf1Q07802 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm15703-201ENSMUST00000120250 880 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm14665-201ENSMUST00000122294 557 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm27438-201ENSMUST00000183480 110 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm9555-201ENSMUST00000200908 583 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm44545-201ENSMUST00000208262 746 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.38□□□□□ -0.43
Ebf1Q07802 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ebf1Q07802 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ebf1Q07802 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ebf1Q07802 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ebf1Q07802 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.36□□□□□ -0.43
Ebf1Q07802 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms