Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcgP82348 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SgcgP82348 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SgcgP82348 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SgcgP82348 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.04□□□□□ -0.48
SgcgP82348 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.04□□□□□ -0.48
SgcgP82348 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.04□□□□□ -0.48
SgcgP82348 Rprl1-201ENSMUST00000158050 327 ntBASIC12.04□□□□□ -0.48
SgcgP82348 Gm17040-202ENSMUST00000170597 889 ntBASIC12.04□□□□□ -0.48
SgcgP82348 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm28071-201ENSMUST00000190355 478 ntBASIC12.04□□□□□ -0.48
SgcgP82348 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.04□□□□□ -0.48
SgcgP82348 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
SgcgP82348 Gm43962-201ENSMUST00000203898 190 ntBASIC12.04□□□□□ -0.48
SgcgP82348 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.04□□□□□ -0.48
SgcgP82348 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SgcgP82348 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
SgcgP82348 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcgP82348 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.03□□□□□ -0.48
SgcgP82348 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SgcgP82348 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcgP82348 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.03□□□□□ -0.48
SgcgP82348 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SgcgP82348 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.03□□□□□ -0.48
SgcgP82348 Gm12266-201ENSMUST00000120311 962 ntBASIC12.03□□□□□ -0.48
SgcgP82348 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.03□□□□□ -0.48
SgcgP82348 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.03□□□□□ -0.48
SgcgP82348 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
SgcgP82348 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Nsd1-205ENSMUST00000224693 852 ntBASIC12.03□□□□□ -0.48
SgcgP82348 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcgP82348 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgcgP82348 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
SgcgP82348 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgcgP82348 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.02□□□□□ -0.48
SgcgP82348 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
SgcgP82348 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.02□□□□□ -0.48
SgcgP82348 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcgP82348 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
SgcgP82348 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgcgP82348 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SgcgP82348 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcgP82348 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SgcgP82348 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.02□□□□□ -0.49
SgcgP82348 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.02□□□□□ -0.49
SgcgP82348 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
SgcgP82348 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcgP82348 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcgP82348 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgcgP82348 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms