Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.17□□□□□ -0.3
PrkcbP68404 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.17□□□□□ -0.3
PrkcbP68404 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.17□□□□□ -0.3
PrkcbP68404 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PrkcbP68404 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.17□□□□□ -0.3
PrkcbP68404 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm18753-201ENSMUST00000201000 566 ntBASIC13.17□□□□□ -0.3
PrkcbP68404 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.17□□□□□ -0.3
PrkcbP68404 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PrkcbP68404 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PrkcbP68404 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PrkcbP68404 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.16□□□□□ -0.3
PrkcbP68404 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.16□□□□□ -0.3
PrkcbP68404 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
PrkcbP68404 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PrkcbP68404 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PrkcbP68404 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Gm17040-202ENSMUST00000170597 889 ntBASIC13.16□□□□□ -0.3
PrkcbP68404 Gm25732-201ENSMUST00000175168 60 ntBASIC13.16□□□□□ -0.3
PrkcbP68404 Gm27552-201ENSMUST00000183351 62 ntBASIC13.16□□□□□ -0.3
PrkcbP68404 Gm27844-201ENSMUST00000183613 62 ntBASIC13.16□□□□□ -0.3
PrkcbP68404 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PrkcbP68404 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.16□□□□□ -0.3
PrkcbP68404 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.16□□□□□ -0.3
PrkcbP68404 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.16□□□□□ -0.3
PrkcbP68404 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PrkcbP68404 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.16□□□□□ -0.3
PrkcbP68404 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PrkcbP68404 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PrkcbP68404 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PrkcbP68404 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.15□□□□□ -0.3
PrkcbP68404 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.15□□□□□ -0.3
PrkcbP68404 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PrkcbP68404 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.15□□□□□ -0.3
PrkcbP68404 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.15□□□□□ -0.3
PrkcbP68404 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
PrkcbP68404 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
PrkcbP68404 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrkcbP68404 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.15□□□□□ -0.3
PrkcbP68404 Gm12266-201ENSMUST00000120311 962 ntBASIC13.15□□□□□ -0.3
PrkcbP68404 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.15□□□□□ -0.3
PrkcbP68404 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
PrkcbP68404 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PrkcbP68404 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.15□□□□□ -0.3
PrkcbP68404 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.15□□□□□ -0.3
PrkcbP68404 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms