Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lhx1P63006 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.98□□□□□ -0.49
Lhx1P63006 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Mir7677-201ENSMUST00000184226 67 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Gm7003-201ENSMUST00000195089 312 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Lhx1P63006 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx1P63006 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.98□□□□□ -0.49
Lhx1P63006 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx1P63006 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Lhx1P63006 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lhx1P63006 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.97□□□□□ -0.49
Lhx1P63006 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lhx1P63006 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.97□□□□□ -0.49
Lhx1P63006 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Gm43184-201ENSMUST00000197247 542 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Gm4607-201ENSMUST00000206649 577 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Lhx1P63006 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.97□□□□□ -0.49
Lhx1P63006 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Lhx1P63006 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.97□□□□□ -0.49
Lhx1P63006 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.97□□□□□ -0.49
Lhx1P63006 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lhx1P63006 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.96□□□□□ -0.49
Lhx1P63006 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lhx1P63006 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lhx1P63006 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lhx1P63006 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lhx1P63006 Gm12217-201ENSMUST00000118858 696 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 Gm15711-201ENSMUST00000118889 535 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 Gm12380-201ENSMUST00000119012 544 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Gm15610-201ENSMUST00000120584 195 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lhx1P63006 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.96□□□□□ -0.49
Lhx1P63006 Mir6927-201ENSMUST00000184494 71 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 Gm8956-201ENSMUST00000203939 825 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 Gm270-201ENSMUST00000223010 976 ntBASIC11.96□□□□□ -0.49
Lhx1P63006 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx1P63006 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms