Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LmnaP48678 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LmnaP48678 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
LmnaP48678 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Gm9062-201ENSMUST00000117712 727 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Gm11978-201ENSMUST00000122315 466 ntBASIC12.79□□□□□ -0.36
LmnaP48678 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LmnaP48678 Gm17208-201ENSMUST00000168388 535 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Gm25700-201ENSMUST00000177693 110 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.79□□□□□ -0.36
LmnaP48678 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.79□□□□□ -0.36
LmnaP48678 Gm44551-201ENSMUST00000208804 171 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 CT009495.1-201ENSMUST00000224221 862 ntBASIC12.79□□□□□ -0.36
LmnaP48678 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.79□□□□□ -0.36
LmnaP48678 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.79□□□□□ -0.36
LmnaP48678 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LmnaP48678 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
LmnaP48678 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Gm18719-201ENSMUST00000196696 1413 ntBASIC12.79□□□□□ -0.36
LmnaP48678 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Gm25214-201ENSMUST00000104573 129 ntBASIC12.78□□□□□ -0.36
LmnaP48678 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.78□□□□□ -0.36
LmnaP48678 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Gm19459-201ENSMUST00000176240 835 ntBASIC12.78□□□□□ -0.36
LmnaP48678 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Gm8885-201ENSMUST00000189382 598 ntBASIC12.78□□□□□ -0.36
LmnaP48678 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.78□□□□□ -0.36
LmnaP48678 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LmnaP48678 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.78□□□□□ -0.36
LmnaP48678 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.78□□□□□ -0.36
LmnaP48678 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LmnaP48678 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms