Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col2a1P28481 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.66□□□□□ -0.22
Col2a1P28481 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col2a1P28481 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.66□□□□□ -0.22
Col2a1P28481 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.66□□□□□ -0.22
Col2a1P28481 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Col2a1P28481 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Gm8342-201ENSMUST00000209839 757 ntBASIC13.66□□□□□ -0.22
Col2a1P28481 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.66□□□□□ -0.22
Col2a1P28481 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.66□□□□□ -0.22
Col2a1P28481 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.66□□□□□ -0.22
Col2a1P28481 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col2a1P28481 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Col2a1P28481 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col2a1P28481 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col2a1P28481 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col2a1P28481 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.65□□□□□ -0.22
Col2a1P28481 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col2a1P28481 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col2a1P28481 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.65□□□□□ -0.22
Col2a1P28481 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Gm14665-201ENSMUST00000122294 557 ntBASIC13.65□□□□□ -0.22
Col2a1P28481 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.65□□□□□ -0.22
Col2a1P28481 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col2a1P28481 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.65□□□□□ -0.22
Col2a1P28481 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.65□□□□□ -0.22
Col2a1P28481 Gm43852-201ENSMUST00000202098 917 ntBASIC13.65□□□□□ -0.22
Col2a1P28481 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.65□□□□□ -0.22
Col2a1P28481 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col2a1P28481 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col2a1P28481 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.64□□□□□ -0.23
Col2a1P28481 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col2a1P28481 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.64□□□□□ -0.23
Col2a1P28481 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col2a1P28481 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col2a1P28481 Gm14942-201ENSMUST00000119642 336 ntBASIC13.64□□□□□ -0.23
Col2a1P28481 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.64□□□□□ -0.23
Col2a1P28481 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col2a1P28481 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.64□□□□□ -0.23
Col2a1P28481 Gm7600-201ENSMUST00000209657 785 ntBASIC13.64□□□□□ -0.23
Col2a1P28481 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col2a1P28481 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col2a1P28481 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col2a1P28481 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms