Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Igh-VJ558P01758 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.53□□□□□ -0.72
Igh-VJ558P01758 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Igh-VJ558P01758 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm23270-201ENSMUST00000104055 131 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm12241-201ENSMUST00000118330 726 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm15547-201ENSMUST00000122152 333 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm17931-201ENSMUST00000208132 634 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm21769-201ENSMUST00000211922 111 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Igh-VJ558P01758 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Gm14726-201ENSMUST00000120623 896 ntBASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Gm2991-201ENSMUST00000173338 480 ntBASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.51□□□□□ -0.73
Igh-VJ558P01758 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms