Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Cxcl13O55038 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm23699-201ENSMUST00000158835 135 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm43947-201ENSMUST00000203019 959 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm44100-201ENSMUST00000204329 436 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm8959-201ENSMUST00000213150 571 ntBASIC10.3□□□□□ -0.76
Cxcl13O55038 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Cxcl13O55038 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Cxcl13O55038 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm14263-201ENSMUST00000117955 746 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm13611-201ENSMUST00000118269 318 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm11941-201ENSMUST00000119904 610 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm4482-201ENSMUST00000200876 742 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.29□□□□□ -0.76
Cxcl13O55038 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.29□□□□□ -0.76
Cxcl13O55038 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Cxcl13O55038 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Cxcl13O55038 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cxcl13O55038 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Cxcl13O55038 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms