Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hps1O08983 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.39□□□□□ -0.59
Hps1O08983 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hps1O08983 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hps1O08983 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.39□□□□□ -0.59
Hps1O08983 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hps1O08983 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hps1O08983 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.38□□□□□ -0.59
Hps1O08983 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.38□□□□□ -0.59
Hps1O08983 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.38□□□□□ -0.59
Hps1O08983 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Hps1O08983 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Gm19309-201ENSMUST00000218295 205 ntBASIC11.38□□□□□ -0.59
Hps1O08983 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.38□□□□□ -0.59
Hps1O08983 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.38□□□□□ -0.59
Hps1O08983 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.38□□□□□ -0.59
Hps1O08983 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hps1O08983 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hps1O08983 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.37□□□□□ -0.59
Hps1O08983 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hps1O08983 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Hps1O08983 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.37□□□□□ -0.59
Hps1O08983 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hps1O08983 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gm16202-201ENSMUST00000117532 544 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Gm12241-201ENSMUST00000118330 726 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.37□□□□□ -0.59
Hps1O08983 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gm27320-201ENSMUST00000184892 109 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.37□□□□□ -0.59
Hps1O08983 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hps1O08983 Gm16372-201ENSMUST00000073088 450 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
Hps1O08983 Gm24526-201ENSMUST00000082921 158 ntBASIC11.37□□□□□ -0.59
Hps1O08983 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms