Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clrn2B2RVW2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.08□□□□□ -0.15
Clrn2B2RVW2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm12795-201ENSMUST00000117594 539 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm11949-201ENSMUST00000117640 372 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm11675-201ENSMUST00000121873 832 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm6485-201ENSMUST00000160676 439 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Gm18893-201ENSMUST00000198416 943 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clrn2B2RVW2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm15004-201ENSMUST00000119192 630 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Mir7076-201ENSMUST00000183519 74 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm37299-201ENSMUST00000193951 826 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm37905-201ENSMUST00000195310 341 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm43186-201ENSMUST00000198130 824 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gm44882-201ENSMUST00000205702 802 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clrn2B2RVW2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms