Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm26927-201ENSMUST00000182385 965 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm45930-201ENSMUST00000221330 292 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm22058-201ENSMUST00000083393 310 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Snf8Q9CZ28 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Snf8Q9CZ28 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snf8Q9CZ28 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms