Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm3619-201ENSMUST00000219947 775 ntBASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cldnd1Q9CQX5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm14760-201ENSMUST00000121831 999 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm18367-201ENSMUST00000176139 600 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm37458-201ENSMUST00000194055 410 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm18059-201ENSMUST00000208073 580 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldnd1Q9CQX5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldnd1Q9CQX5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldnd1Q9CQX5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cldnd1Q9CQX5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldnd1Q9CQX5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Cldnd1Q9CQX5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldnd1Q9CQX5 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm15004-201ENSMUST00000119192 630 ntBASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm5419-201ENSMUST00000119301 527 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms